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    Item type:Publication,
    Compiling and analyzing the non-native flora of a megadiverse Neotropical country: a new catalogue for continental Ecuador
    (2025)
    Ileana Herrera
    ;
    Anahí Vargas
    ;
    Kimberly Rizzo
    ;
    Zhofre Aguirre
    ;
    Isabella Dillon
    In this study, we provide a comprehensive and updated inventory of the non-native vascular flora of continental Ecuador and analyze its key biogeographic and ecological attributes to inform biological invasion management. We recorded 486 non-native wild plant taxa, 52% of which are naturalized and 48% casual. This inventory was primarily based on secondary data (published literature, scientific reports, and online databases) and enriched through fieldwork and expert consultations. It includes information on taxonomy, life form, lifespan, origin, first year of record, and spatial-temporal distribution. The most represented families were Poaceae (16%), Asteraceae (10%), and Fabaceae (9%). About 60% of the taxa originated from Asia and/or Africa, and 67% are herbs. The earliest introductions date back to the late 18<jats:sup>th</jats:sup> century, with an exponential increase beginning in ca. 1915. Only 13% of the taxa have a minimum residence time exceeding 125 years. The Andes accounted for the highest number of taxa (93%, including taxa shared with other regions). Nearly 80% of the non-native taxa have documented uses, most commonly ornamental (42%) and medicinal (38%). Naturalized taxa tended to have longer residence times and more frequently reported uses than casual ones, suggesting these traits may influence naturalization likelihood. Due to limited systematic sampling across the country, particularly outside the Central Andes, some spatial bias may exist. However, the integration of citizen science-derived data, a methodological innovation in our study, proved to be a promising approach for addressing knowledge gaps and improving detection efforts in regions with limited research capacity. Our findings offer a foundation for advancing the management of biological invasions in Ecuador through early detection, rapid response (EDRR), and species prioritization. Finally, we provide a practical, adaptable and replicable framework, based on citizen science and appropriate statistical analyses, for developing national inventories of non-native plant species in data-deficient countries.
  • Some of the metrics are blocked by your 
    Item type:Publication,
    Compiling and analyzing the non-native flora of a megadiverse Neotropical country: a new catalogue for continental Ecuador
    (2025)
    Ileana Herrera
    ;
    Anahí Vargas
    ;
    Kimberly Rizzo
    ;
    Zhofre Aguirre
    ;
    Isabella Dillon
    In this study, we provide a comprehensive and updated inventory of the non-native vascular flora of continental Ecuador and analyze its key biogeographic and ecological attributes to inform biological invasion management. We recorded 486 non-native wild plant taxa, 52% of which are naturalized and 48% casual. This inventory was primarily based on secondary data (published literature, scientific reports, and online databases) and enriched through fieldwork and expert consultations. It includes information on taxonomy, life form, lifespan, origin, first year of record, and spatial-temporal distribution. The most represented families were Poaceae (16%), Asteraceae (10%), and Fabaceae (9%). About 60% of the taxa originated from Asia and/or Africa, and 67% are herbs. The earliest introductions date back to the late 18<jats:sup>th</jats:sup> century, with an exponential increase beginning in ca. 1915. Only 13% of the taxa have a minimum residence time exceeding 125 years. The Andes accounted for the highest number of taxa (93%, including taxa shared with other regions). Nearly 80% of the non-native taxa have documented uses, most commonly ornamental (42%) and medicinal (38%). Naturalized taxa tended to have longer residence times and more frequently reported uses than casual ones, suggesting these traits may influence naturalization likelihood. Due to limited systematic sampling across the country, particularly outside the Central Andes, some spatial bias may exist. However, the integration of citizen science-derived data, a methodological innovation in our study, proved to be a promising approach for addressing knowledge gaps and improving detection efforts in regions with limited research capacity. Our findings offer a foundation for advancing the management of biological invasions in Ecuador through early detection, rapid response (EDRR), and species prioritization. Finally, we provide a practical, adaptable and replicable framework, based on citizen science and appropriate statistical analyses, for developing national inventories of non-native plant species in data-deficient countries.
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    Item type:Publication,
    Phylogeny of Weinmannia (Cunoniaceae) reveals the contribution of the southern extratropics to tropical Andean biodiversity
    (2025)
    Ricardo A. Segovia
    ;
    Eduardo Aguirre-Mazzi
    ;
    Christine E. Edwards
    ;
    Alexander G. Linan
    ;
    Alfredo Fuentes
    The Andes are a relatively young mountain range with impressive biodiversity, but the biogeographic processes underlying its hyperdiversity are still being unraveled. Novel mid- to high-elevation climates may have served as a biological corridor for the immigration of temperate-adapted lineages to more equatorial latitudes, contributing unknown levels of diversity to this region. We tested the hypothesis that Weinmannia is a lineage of extratropical origin that recently reached and then diversified extensively in the tropical Andes. Using a 2bRAD seq approach to generate a time-calibrated phylogeny for the genus, we found that extratropical species were placed as sister to the rest of Weinmannia and that younger clades were distributed towards more equatorial latitudes. Although Weinmannia exhibited low niche conservatism in elevation and latitude, trait reconstructions of climatic variables showed that the common ancestor of Weinmannia occupied cool climates, with high conservatism of thermal and water availability niche across the phylogeny. Thus, Andean uplift likely created habitats with suitable environmental conditions, providing a dispersal route for extant Weinmannia to colonize the tropical Andes from the southern extratropics. These southern lineages likely converged with those originating in other tropical and extratropical centers of diversification, providing multiple origins for the hyperdiversity in the modern montane forests of the tropical Andes.
      35
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    Item type:Publication,
    Genotyping‐by‐sequencing informs conservation of Andean palms sources of non‐timber forest products
    (2024)
    Nicolás Peñafiel Loaiza
    ;
    Abigail H. Chafe
    ;
    Mónica Moraes R
    ;
    ;
    Julissa Roncal
    Conservation and sustainable management of lineages providing non‐timber forest products are imperative under the current global biodiversity loss. Most non‐timber forest species, however, lack genomic studies that characterize their intraspecific variation and evolutionary history, which inform species' conservation practices. Contrary to many lineages in the Andean biodiversity hotspot that exhibit high diversification, the genus <jats:italic>Parajubaea</jats:italic> (Arecaceae) has only three species despite the genus' origin 22 million years ago. Two of the three palm species, <jats:italic>P. torallyi</jats:italic> and <jats:italic>P. sunkha</jats:italic>, are non‐timber forest species endemic to the Andes of Bolivia and are listed as IUCN endangered. The third species, <jats:italic>P. cocoides</jats:italic>, is a vulnerable species with unknown wild populations. We investigated the evolutionary relationships of <jats:italic>Parajubaea</jats:italic> species and the genetic diversity and structure of wild Bolivian populations. Sequencing of five low‐copy nuclear genes (3753 bp) challenged the hypothesis that <jats:italic>P. cocoides</jats:italic> is a cultigen that originated from the wild Bolivian species. We further obtained up to 15,134 de novo single‐nucleotide polymorphism markers by genotyping‐by‐sequencing of 194 wild <jats:italic>Parajubaea</jats:italic> individuals. Our total DNA sequencing effort rejected the taxonomic separation of the two Bolivian species. As expected for narrow endemic species, we observed low genetic diversity, but no inbreeding signal. We found three genetic clusters shaped by geographic distance, which we use to propose three management units. Different percentages of missing genotypic data did not impact the genetic structure of populations. We use the management units to recommend in situ conservation by creating new protected areas, and ex situ conservation through seed collection.
      18
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    Item type:Publication,
    Taxonomy based on science is necessary for global conservation
    (2018)
    Thomson S.A.
    ;
    Pyle R.L.
    ;
    Ahyong S.T.
    ;
    Alonso-Zarazaga M.
    ;
    Ammirati J.
    [No abstract available]
    Scopus© Citations 170  34
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    Item type:Publication,
    Alkaloid Profiling and Anti-Cholinesterase Potential of Three Different Genera of Amaryllidaceae Collected in Ecuador: Urceolina Rchb., Clinanthus Herb. and Stenomesson Herb.
    (2024)
    Luciana R. Tallini
    ;
    Karen Acosta León
    ;
    Raúl Chamorro
    ;
    Edison H. Osorio
    ;
    Jaume Bastida
    Ecuador is an important center of biodiversity for the plant subfamily Amaryllidoideae, known for its important bioactive molecules. This study aimed to assess the chemical and biological potential of four different Amaryllidoideae species collected in Ecuador: Urceolina formosa, Urceolina ruthiana, Clinanthus incarnatus, and Stenomesson aurantiacum. Twenty-six alkaloids were identified in the bulb extracts of these species using GC-MS. The extract of S. aurantiacum exhibited the greatest structural diversity and contained the highest amounts of alkaloids, particularly lycorine and galanthamine. Only for this species, identification of all the alkaloids belonging to this chemical profile was not possible. Six of them remain unidentified. The potential of these three Amaryllidoideae genera against Alzheimer’s disease was then evaluated by measuring their AChE and BuChE inhibitory activity, revealing that C. incarnatus and U. formosa (from Sucumbíos province) showed the best results with IC50 values of 1.73 ± 0.25 and 30.56 ± 1.56 µg·mL−1, respectively. Molecular dynamic assays were conducted to characterize the possible interactions that occurs among 2-hydroxyanhydrolycorine and the AChE enzyme, concluded that it is stabilized in the pocket in a similar way to galanthamine. This study expands our understanding of the biodiversity of Amaryllidoideae species from Ecuador, highlighting their potential as source of chemical compounds with pharmaceutical applications.
      16
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    Item type:Publication,
    Molecular Systematics of Threatened Seed Plant Species Endemic in the Caribbean Islands
    (2013) ;
    Jestrow B.
    ;
    Calonje M.
    ;
    Peguero B.
    ;
    Jiménez F.
    A review of available Caribbean Island red-lists species (CR and EN categories based on the IUCN guidelines from 2001, and E category established according to the IUCN guidelines from 1980) is presented. A database of over 1,300 endemic species that are either Critically Endangered or Endangered sensu IUCN was created. There are molecular systematic studies available for 112 of them. Six of these species (in six genera) are the only members of early divergent lineages that are sister to groups composed of a large number of clades. Seven of the species (in seven genera) belong to clades that have a small number of taxa but are sister to species/genus-rich clades. Ten of the species (in six genera) are sister to taxa restricted to South America or nested in clades endemic to this region. Fifty-seven of the species (in 35 genera) are sister to Caribbean Island endemic species. Erigeron belliastroides, an Endangered (EN) Cuban endemic, is sister to the Galapagos genus Darwiniothamnus. The phylogenetic placement of four of the threatened species resulted in changes in their taxonomic placement; they belong to polyphyletic or paraphyletic genera. © 2013 The New York Botanical Garden.
      18
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    Item type:Publication,
    Water quality assessment of the cutuchi river basin (Ecuador): A review of technical documents
    (2021)
    Zapata D.
    ;
    ;
    Páez-Vacas, Mónica 
    ;
    The Cutuchi River Basin extends over the inter-Andean valley south of the Cotopaxi Volcano, in Ecuador. It flows through two provinces, Cotopaxi and Tungurahua, and its waters are extensively used to irrigate crops that provide food to the main cities in the country. Unfortunately, the basin receives untreated domestic and industrial discharges. The need for an environmental quality assessment of the river has been acknowledged over the years. The aim of this study is to gather information about water quality of the Cutuchi River through a historical bibliographic review. A total of 57 works published between 2007 and 2018 were found, including books, articles, thesis and project reports. Only 18 documents provided biological, physical, or chemical data linked to water quality. The data obtained through the literature review were compared with maximum thresholds from national and international regulations. Unfortunately, revised studies were scattered on time and randomly along the basin and did not provide robust information to evaluate the state of the water-system. Some contamination was detected significantly exceeding safety thresholds. More exhaustive studies along the basin are needed as a baseline to help the decision makers to design management plans and mitigate human impacts. © 2020 Institute of Physics Publishing. All rights reserved.
      40
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    In vitro and in silico analysis of galanthine from Zephyranthes carinata as an inhibitor of acetylcholinesterase
    (2022)
    Sierra, K.
    ;
    de Andrade, J.P.
    ;
    R. Tallini, L.
    ;
    Osorio, E.H.
    ;
    Yañéz, O.
    Zephyranthes carinata Herb., a specie of the Amaryllidoideae subfamily, has been reported to have inhibitory activity against acetylcholinesterase. However, scientific evidence related to their bioactive alkaloids has been lacking. Thus, this study describes the isolation of the alkaloids of this plant, and their inhibition of the enzymes acetylcholinesterase (eeAChE) and butyrylcholinesterase (eqBuChE), being galanthine the main component. Additionally, haemanthamine, hamayne, lycoramine, lycorine, tazettine, trisphaeridine and vittatine/crinine were also isolated. The results showed that galanthine has significant activity at low micromolar concentrations for eeAChE (IC50 = 1.96 μg/mL). The in-silico study allowed to establish at a molecular level the high affinity and the way galanthine interacts with the active site of the TcAChE enzyme, information that corroborates the result of the experimental IC50. However, according to molecular dynamics (MD) analysis, it is also suggested that galanthine presents a different inhibition mode that the one observed for galanthamine, by presenting interaction with peripheral anionic binding site of the enzyme, which prevents the entrance and exit of molecules from the active site. Thus, in vitro screening assays plus rapid computer development play an essential role in the search for new cholinesterase inhibitors by identifying unknown bio-interactions between bioactive compounds and biological targets. © 2022 The Authors
      26
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    Item type:Publication,
    Recent diversification in the high Andes: Unveiling the evolutionary history of the Ecuadorian hillstar, Oreotrochilus chimborazo (Apodiformes: Trochilidae)
    (2021)
    Bonaccorso E.
    ;
    Rodríguez-Saltos C.A.
    ;
    Freile J.F.
    ;
    Peñafiel N.
    ;
    Rosado-Llerena L.
    Studying the genetic signatures of evolutionary diversification in young lineages is among the most promising approaches for unveiling the processes behind speciation. Here, we focus on Oreotrochilus chimborazo, a high Andean species of hummingbird that might have experienced rapid diversification in the recent past. To understand the evolution of this species, we generated a dataset of ten microsatellite markers and complementary data on morphometrics, plumage variation and ecological niches. We applied a series of population and coalescent-based analyses to understand the population structure and differentiation within the species, in addition to the signatures of current and historical gene flow, the location of potential contact zones and the relationships among lineages. We found that O. chimborazo comprises three genetic groups: one corresponding to subspecies O. c. chimborazo, from Chimborazo volcano and surroundings, and two corresponding to the northern and southern ranges of subspecies O. c. jamesonii, found from the extreme south of Colombia to southern Ecuador. We inferred modest levels of both contemporary and historical gene flow and proposed the location of a contact zone between lineages. Also, our coalescent-based analyses supported a rapid split among these three lineages during the mid-to-late Holocene. We discuss our results in the light of past and present potential distributions of the species, in addition to evolutionary trends seen in other Andean hummingbirds. © 2021 The Linnean Society of London, Biological Journal of the Linnean Society.
      28