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    From smartphones to satellites: Integrating citizen science and high-resolution environmental data for mapping plant invasions in urban mountain landscapes
    (Elsevier BV, 2026-11) ; ; ;
    Buenaño, María Belén
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    Quijano-Abril, Mario
    Predicting the distribution of invasive species in urban mountain ecosystems is important for biodiversity conservation and effective management. We developed a sequential two-stage species distribution modelling framework to characterize habitat suitability for the invasive vine Thunbergia alata in the Metropolitan District of Quito and to evaluate the contribution of citizen science records, systematic field surveys, and multi-source environmental data. In the first stage, 637 iNaturalist occurrence records retained after quality control were combined with 12 bioclimatic variables from WorldClim to develop a preliminary MaxEnt model. The resulting habitat suitability map was classified into five categories and used to design a stratified field survey across the predicted suitability gradient. We sampled 1009 locations, obtaining 450 confirmed presences and 559 independent absence records. In the second stage, the field-derived occurrence data were used to develop a refined MaxEnt model incorporating the bioclimatic variables together with elevation, slope, land cover, VIIRS nighttime lights, NDVI, and the red spectral band. Environmental predictors were standardized to a common 5 m. spatial resolution and screened for multicollinearity. Both models were evaluated using receiver-operating characteristic analyses and AUC, with 10 replicate runs and 25% of occurrence records withheld for testing. Mean AUC values were 0.851 ± 0.012 and 0.902 ± 0.008 for the preliminary and refined models, respectively. In the preliminary model, habitat suitability was primarily associated with broad-scale climatic variables, particularly precipitation seasonality and temperature-related variables. In the refined model, nighttime light intensity and elevation showed the highest contributions and permutation importance, while NDVI and climatic variables also contributed to model predictions. Independent field validation showed that 47.2% of absence observations occurred in the two lowest suitability classes, whereas 33.5% occurred in areas classified as highly or very highly suitable. The refined model therefore captured substantial spatial variation in habitat suitability while also revealing areas of mismatch between predicted suitability and field observations. These results demonstrate the value of sequentially integrating citizen science, systematic field observations, and fine-resolution environmental predictors to improve invasive species mapping. This framework provides a practical approach for supporting targeted monitoring and management of invasive plants in complex urban mountain ecosystems. © 2026 The Authors.
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    Path for recovery: an ecological overview of the Jambato Harlequin Toad (Bufonidae: <i>Atelopus ignescens</i>) in its last known locality, Angamarca Valley, Ecuador
    (2024)
    Mateo A. Vega-Yánez
    ;
    Amanda B. Quezada-Riera
    ;
    Blanca Rios-Touma
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    María del Carmen Vizcaíno-Barba
    ;
    William Millingalli
    The Jambato Harlequin toad (<jats:italic>Atelopus ignescens</jats:italic>), a formerly abundant species in the Andes of Ecuador, faced a dramatic population decline in the 1980s, with its last recorded sighting in 1988. The species was considered Extinct by the IUCN until 2016, when a fortuitous discovery of one Jambato by a local boy reignited hope. In this study, we present findings from an investigation conducted in the Angamarca parish, focusing on distribution, abundance, habitat preferences, ecology, disease susceptibility, and dietary habits of the species. In one year we identified 71 individuals at different stages of development in various habitats, with a significant presence in agricultural mosaic areas and locations near water sources used for crop irrigation, demonstrating the persistence of the species in a complex landscape, with considerable human intervention. The dietary analysis based on fecal samples indicated a diverse prey selection, primarily comprising arthropods such as Acari, Coleoptera, and ants. Amphibian declines have been associated with diseases and climate change; notably, our study confirmed the presence of the pathogen <jats:italic>Batrachochytrium dendrobatidis</jats:italic> (<jats:italic>Bd</jats:italic>), but, surprisingly, none of the infected Jambatos displayed visible signs of illness. When analyzing climatic patterns, we found that there are climatic differences between historical localities and Angamarca; the temporal analysis also exposes a generalized warming trend. Finally, in collaboration with the local community, we developed a series of management recommendations for terrestrial and aquatic environments occupied by the Jambato.
      30
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    Systematics of south american snail-eating snakes (Serpentes, dipsadini), with the description of five new species from ecuador and peru
    (2018)
    Arteaga A.
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    ;
    Mebert K.
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    Peñafiel N.
    ;
    Aguiar G.
    A molecular phylogeny of the Neotropical snail-eating snakes (tribe Dipsadini) is presented including 43 (24 for the first time) of the 77 species, sampled for both nuclear and mitochondrial genes. Morphological and phylogenetic support was found for four new species of Dipsas and one of Sibon, which are described here based on their unique combination of molecular, meristic, and color pattern characteristics. Sibynomorphus is designated as a junior subjective synonym of Dipsas. Dipsas latifrontalis and D. palmeri are resurrected from the synonymy of D. peruana. Dipsas latifasciata is transferred from the synonymy of D. peruana to the synonymy of D. palmeri. A new name, D. jamespetersi, is erected for the taxon currently known as Sibynomorphus petersi. Re-descriptions of D. latifrontalis and D. peruana are presented, as well as the first photographic voucher of an adult specimen of D. latifrontalis, along with photographs of all known Ecuadorian Dipsadini species. The first country record of D. variegata in Ecuador is provided and D. oligozonata removed from the list of Peruvian herpetofauna. With these changes, the number of Dipsadini reported in Ecuador increases to 22, 18 species of Dipsas and four of Sibon. © 2018, Pensoft Publishers. All rights reserved.
      29
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    A mouth full of blood – autohaemorrhaging in three Ecuadorian snakes (Squamata: Colubridae & Tropidophiidae)
    (2023)
    Rödel M.-O.
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    Loaiza-Lange A.
    ;
    Penner J.
    ;
    Neira-Salamea K.D.
    ;
    [No abstract available]
      38
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    Item type:Publication,
    First Insights into the Venom Composition of Two Ecuadorian Coral Snakes
    (2022)
    Hernández-Altamirano, J.A.
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    ;
    Medina-Villamizar, E.J.
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    Quirola, D.R.
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    Patel, K.
    Micrurus is a medically relevant genus of venomous snakes composed of 85 species. Bites caused by coral snakes are rare, but they are usually associated with very severe and life-threatening clinical manifestations. Ecuador is a highly biodiverse country with a complex natural environment, which is home to approximately 20% of identified Micrurus species. Additionally, it is on the list of Latin American countries with the highest number of snakebites. However, there is no local antivenom available against the Ecuadorian snake venoms, and the biochemistry of these venoms has been poorly explored. Only a limited number of samples collected in the country from the Viperidae family were recently characterised. Therefore, this study addressed the compositional patterns of two coral snake venoms from Ecuador, M. helleri and M. mipartitus, using venomics strategies, integrating sample fractionation, gel electrophoresis, and mass spectrometry. Chromatographic and electrophoretic profiles of these snake venoms revealed interspecific variability, which was ascertained by mass spectrometry. The two venoms followed the recently recognised dichotomic toxin expression trends displayed by Micrurus species: M. helleri venom contains a high proportion (72%) of phospholipase A2, whereas M. mipartitus venom is dominated by three-finger toxins (63%). A few additional protein families were also detected in these venoms. Overall, these results provide the first comprehensive views on the composition of two Ecuadorian coral snake venoms and expand the knowledge of Micrurus venom phenotypes. These findings open novel perspectives to further research the functional aspects of these biological cocktails of PLA2s and 3FTxs and stress the need for the preclinical evaluation of the currently used antivenoms for therapeutic purposes in Ecuador. © 2022 by the authors.
      37
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    Item type:Publication,
    Feeding ecology of the Terciopelo pit viper snake (Bothrops asper) in Ecuador
    (2023)
    Loaiza-Lange A.
    ;
    Székely D
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    Torres-Carvajal O.
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    Tinoco N.
    ;
    Thoroughly documenting prey items and diet composition is crucial for understanding a predator’s role in the ecosystem. In gape restricted predators, such as snakes, documenting and analyzing the type and size of the prey is important to interpret their ecological role. We describe the diet patterns of a species of venomous snake, the Terciopelo pit viper (Bothrops asper), from its Ecuadorian populations. Examining the gastrointestinal contents of museum specimens collected over an extensive area of the Pacific lowlands of Ecuador, we encountered 69 identifiable prey items from four major taxonomic groups (amphibians, centipedes, mammals, and reptiles). We evaluated the observed composition of prey to check for differences between sexes and size-classes. To complement our observations of the Terciopelo species complex throughout their distribution, we carried out a systematic literature review. Our data show an ontogenetic shift in diet, with a transition from more diverse diet in juveniles towards a mammal-specialized diet in adults, and distinct proportion of prey taxa between the sexes in the juvenile size class. Copyright 2023 Loaiza-Lange et al.
      23
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    A retrospective study of clinical and epidemiological characteristics of snakebite in Napo Province, Ecuadorian Amazon
    (2023)
    Patiño R.S.P.
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    ;
    Robles-Loaiza A.A.
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    Santacruz-Ortega P
    ;
    Almeida J.R.
    BACKGROUND: Snakebite envenoming remains a relevant public health problem in tropical and subtropical countries. In Ecuador, this is particularly true in an area of great diversity like the Amazon region. Nevertheless, there is scarce information about epidemiological and clinical characteristics of these accidents in this area. METHODS: This was a descriptive and retrospective study of snakebite cases treated at a tertiary hospital in the Napo Province, Ecuadorian Amazon, from 2015 to 2019. We collected sociodemographic and snakebite-related information, clinical aspects and the use of antivenom and antibiotics from medical records. RESULTS: Information from 133 snakebite accidents was reviewed in this time period. Reports of snakebite envenoming decreased over the years. In total, 67% of those bitten were from nearby indigenous communities, which were the most affected groups. When a species was identified, Bothrops atrox was responsible for the highest number of cases registered. Local clinical manifestations were more frequent than systemic signs, in keeping with the typical effects produced by bothropic venoms. Additionally, data showed that more antivenom vials were given than those suggested by the protocol of the Ecuadorian Ministry of Health, in proportion to the grade of severity. Finally, we identified a low incidence of adverse reactions with antivenom administration, as well as a frequent use of antibiotics. CONCLUSIONS: The profile of snakebite accidents in the Napo Province is very similar to that described for other localities in the Amazon region of Ecuador and neighboring countries, with its challenges and limitations. Such aspects underlie the importance of establishing a robust and science-based public health program to respond to this frequent, but neglected, tropical disease. © The Author(s) 2022. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene.
    Scopus© Citations 4  27
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    Venom variation in Bothrops asper lineages from North-Western South America
    (2020)
    Mora-Obando D.
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    Pla D.
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    Lomonte B.
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    Guerrero-Vargas J.A.
    Bothrops asper is a venomous pitviper that is widely distributed and of clinical importance in Mesoamerica and northern South America, where it is responsible for 50–80% of all envenomations by Viperidae species. Previous work suggests that B. asper has a complex phylogeographic structure, with the existence of multiple evolutionarily distinct lineages, particularly in the inter-Andean valleys of north South America. To explore the impact of the evolutionary history of B. asper on venom composition, we have investigated geographic variation in the venom proteome of this species from the populations from the Pacific side of Ecuador and south-western Colombia. Among the 21 classes of venom components identified, proteins from mainly four major toxin families, snake venom metalloproteases (PI- and PII-SVMP), phospholipases A2 (K49- and D49-PLA2s), serine proteinases (SVSP), and C-type lectins-like (CTL) proteins are major contributors to the geographic variability in venom. Principal component analyses demonstrate significant differences in venom composition between B. asper lineages previously identified through combination of molecular, morphological and geographical data, and provide additional insights into the selection pressures modulating venom phenotypes on a geographic scale. In particular, altitudinal zonation within the Andean mountain range stands out as a key ecological factor promoting diversification in venom. In addition, the pattern of distribution of PLA2 molecules among B. asper venoms complements phylogenetic analysis in the reconstruction of the dispersal events that account for the current biogeographic distribution of the present-day species' phylogroups. Ontogenic variation was also evident among venoms from some Ecuadorian lineages, although this age-related variation was less extreme than reported in B. asper venoms from Costa Rica. The results of our study demonstrate a significant impact of phylogenetic history on venom composition in a pitviper and show how analyses of this variation can illuminate the timing of the cladogenesis and ecological events that shaped the current distribution of B. asper lineages. Biological significance: Bothrops asper, called “the ultimate pitviper” due to its defensive behavior, large body size, and medical importance, represents a species complex that is widely distributed from southern México southwards across north-western South America to north-western Perú. This work reports the characterization of the venom proteomes of B. asper lineages from the Pacific sides of Ecuador and south-western Colombia. Multivariate analyses indicate that variability in venom composition among the B. asper lineages is driven by proteins from four major toxin families, presumably in response to selection pressures created by recent and historical ecological conditions created by geological and climatic events from the Pliocene-Pleistocene to the present along the Central and South American Continental Divide. The emerging biogeographic pattern of venom variation, interpreted in the context of the current phylogenetic hypotheses, support and complement previously proposed evolutionary Plio-Pleistocene dispersal events that shaped the present-day distribution range of B. asper lineages. In addition, our venomics data indicate the occurrence of genetic exchange between Colombian and Pacific Costa Rican populations, which may have occurred during the second wave of B. asper migration into Mesoamerica. Our work represents a foundation for a future broader sampling and more complete “-omics” analyses to deepen our understanding of the patterns and causes of venom variation in this medically important pitviper. © 2020 Elsevier B.V.
    Scopus© Citations 21  14
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    A First Look at the Inhibitory Potential of Urospatha sagittifolia (Araceae) Ethanolic Extract for Bothrops atrox Snakebite Envenomation
    (2022)
    Vera-Palacios, A.L.
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    Sacoto-Torres, J.D.
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    Hernández-Altamirano, J.A.
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    Moreno, A.
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    Peñuela-Mora, M.C.
    Bothrops atrox snakebites are a relevant problem in the Amazon basin. In this biodiverse region, the ethnomedicinal approach plays an important role as an alternative to antivenom therapy. Urospatha sagittifolia (Araceae) is a plant used for this purpose; however, its neutralizing properties have not been scientifically accessed. To fill this gap, we investigated the ability of U. sagittifolia to modulate the catalytic activity of Bothrops atrox venom, and their toxic consequences, such as local damage and lethality. The venom profile of B. atrox was assessed by chromatography and electrophoresis. Inhibition of the three main enzymatic and medically important toxins from the venom was evaluated using synthetic substrates and quantified by chromogenic activity assays. Additionally, the neutralization of lethality, hemorrhage and edema were investigated by in vivo assays. The possible interactions between venom proteins and plant molecules were visualized by polyacrylamide gel electrophoresis. Finally, the phytochemical constituents present in the ethanolic extract were determined by qualitative and quantitative analyses. The ethanolic extract reduced the activity of the three main enzymes of venom target, achieving ranges from 19% to 81% of inhibition. Our in vivo venom neuralizations assays showed a significant inhibition of edema (38.72%) and hemorrhage (42.90%). Additionally, lethality was remarkably counteracted. The highest extract ratio evaluated had a 75% survival rate. Our data support the biomedical value of U. sagittifolia as a source of natural enzyme inhibitors able to neutralize catalytically active B. atrox venom toxins and their toxic effects. © 2022 by the authors.
      56
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    A new species of harlequin toad (Bufonidae: Atelopus) from Amazonian Ecuador
    (2024)
    Plewnia, Amadeus
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    Terán-Valdez, Andrea
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    Culebras, Jaime
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    Boistel, Renaud
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    Paluh, Daniel
    For nearly four decades, harlequin toads, genus Atelopus, have suffered unparalleled population declines. While this also results in limited understanding of alphataxonomic relationships, these toads face an urgent need for advances in systematics to inform conservation efforts. However, high intraspecific variation and cryptic diversity have hindered a comprehensive understanding of Atelopus diversity. This is particularly exemplified among Amazonian populations related to A. spumarius, where decades of taxonomic work have not been able yet to unravel relationships between the many forms, while the names coined so far have led to taxonomic confusion leaving numer-ous lineages unnamed. A recent comprehensive phylogenetic study has revealed new insights into the systematics of harlequin toads with an emphasis on Amazonian forms, identifying several unnamed lineages. We here describe one of these evolutionary lineages as a new species, restricted to the Ecuadorian Amazon basin, in an integrative taxonomic approach using molecular, morphological, bioacoustic and larval information. With this, we contribute to a better understanding of Atelopus diversity as the baseline of conservation action.
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