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Phylogeny of Weinmannia (Cunoniaceae) reveals the contribution of the southern extratropics to tropical Andean biodiversity

2025 , Ricardo A. Segovia , Eduardo Aguirre-Mazzi , Christine E. Edwards , Alexander G. Linan , Alfredo Fuentes , Andrea Chaspuengal , Kyle G. Dexter , Francisco Fajardo-Gutiérrez , William Farfan-Rios , Oleas Gallo, Nora Helena , Juan C. Penagos Zuluaga , J. Sebastián Tello

The Andes are a relatively young mountain range with impressive biodiversity, but the biogeographic processes underlying its hyperdiversity are still being unraveled. Novel mid- to high-elevation climates may have served as a biological corridor for the immigration of temperate-adapted lineages to more equatorial latitudes, contributing unknown levels of diversity to this region. We tested the hypothesis that Weinmannia is a lineage of extratropical origin that recently reached and then diversified extensively in the tropical Andes. Using a 2bRAD seq approach to generate a time-calibrated phylogeny for the genus, we found that extratropical species were placed as sister to the rest of Weinmannia and that younger clades were distributed towards more equatorial latitudes. Although Weinmannia exhibited low niche conservatism in elevation and latitude, trait reconstructions of climatic variables showed that the common ancestor of Weinmannia occupied cool climates, with high conservatism of thermal and water availability niche across the phylogeny. Thus, Andean uplift likely created habitats with suitable environmental conditions, providing a dispersal route for extant Weinmannia to colonize the tropical Andes from the southern extratropics. These southern lineages likely converged with those originating in other tropical and extratropical centers of diversification, providing multiple origins for the hyperdiversity in the modern montane forests of the tropical Andes.

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Molecular Markers and Conservation of Plant Species in the Latin-America: The Case of Phaedranassa viridiflora (Amaryllidaceae)

2013 , Oleas Gallo, Nora Helena , Meerow A.W. , Francisco-Ortega J.

Phaedranassa viridiflora (Amaryllidaceae) is an endemic and endangered plant restricted to the Northern Andes in Ecuador. It is known in three locations where it is sympatric with other Phaedranassa species. Phaedranassa viridiflora is the only species of the genus with yellow flowers. We analyzed 13 microsatellite loci to elucidate the genetic structure of the populations of P. viridiflora. Our results provided the first evidence of natural hybridization in the genus (between P. viridiflora and P. dubia in the Pululahua crater of northern Ecuador). The central and southern populations did not show hybridization. Genetic diversity was the highest in the Pululahua population. Central and southern populations have a higher proportion of clones than Pululahua. Bayesian and cluster analysis suggest that the yellow flower type evolved at least three times along the Ecuadorean Andes. In contrast to other Phaedranassa species, Phaedranassa viridiflora shows lower genetic diversity, which is likely related to a vegetative reproductive strategy. © 2013 The New York Botanical Garden (outside the USA).

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Evolutionary history of CAM photosynthesis in Neotropical Clusia: Insights from genomics, anatomy, physiology and climate

2022 , Luján, M. , Oleas Gallo, Nora Helena , Winter, K.

Clusia is a remarkable genus of Neotropical woody plants as its members engage in either C3 photosynthesis or employ, to varying degrees, crassulacean acid metabolism (CAM) photosynthesis. Information about the evolutionary history of CAM in Clusia is scarce. Restriction site-associated sequencing of 64 species (20% of the genus) provided strong support for most of the previously recognized nine lineages. Ancestral reconstruction using maximum parsimony or maximum likelihood under a one-rate model suggested that CAM evolved at least four times independently from a most recent common ancestor (MRCA) with C3, whereas a maximum likelihood two-rate model suggested that CAM was already present in the MRCA followed by reversions to C3 in several lineages. Phylogenetic generalized least square analysis assessed variation in seven leaf anatomical traits and CAM activity measured as δ13C. Results indicate that CAM is highly correlated with palisade mesophyll layer thickness and cell size. In addition, correlation between 19 bioclimatic variables and δ13C was evaluated. It was found that CAM is positively correlated with habitats with a more severe dry season and greater precipitation seasonality. Since CAM is weakly and/or only periodically expressed in many Clusia spp., and thus not readily reflected in δ13C, future analysis of phylogenetically-informed CAM expression in Clusia must include physiological measurements such as CO2 exchange and/or diel changes in leaf acidity for each species under investigation. © 2021 The Linnean Society of London,.

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Isolation and Characterisation of 11 Microsatellite Loci in the Ecuadorian Hillstar Oreotrochilus chimborazo

2017 , Oleas Gallo, Nora Helena , Harvey N. , Rodríguez-Saltos C.A. , Bonaccorso E.

The Ecuadorian Hillstar Oreotrochilus chimborazo is a high Andean hummingbird that inhabits paramo ecosystems from extreme southern Colombia to southern Ecuador. The species is currently divided into three subspecies that differ in morphology and geographic distribution but no molecular differences have been found between them using mitochondrial markers. The aim of this study was to isolate and test microsatellite loci to further explore possible genetic variability between and within these subspecies. Screening an enriched genomic library of O. chimborazo we obtained eleven polymorphic microsatellite loci. These markers will be used to further elucidate evolutionary patterns in the species.

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Muddy boots beget wisdom: Implications for rare or endangered plant species distribution models

2019 , Oleas Gallo, Nora Helena , Feeley K.J. , Fajardo J. , Meerow A.W. , Gebelein J. , Francisco-Ortega J.

Species distribution models (SDMs) are popular tools for predicting the geographic ranges of species. It is common practice to use georeferenced records obtained from online databases to generate these models. Using three species of Phaedranassa (Amaryllidaceae) from the Northern Andes, we compare the geographic ranges as predicted by SDMs based on online records (after standard data cleaning) with SDMs of these records confirmed through extensive field searches. We also review the identification of herbarium collections. The species' ranges generated with corroborated field records did not agree with the species' ranges based on the online data. Specifically, geographic ranges based on online data were significantly inflated and had significantly different and wider elevational extents compared to the ranges based on verified field records. Our results suggest that to generate accurate predictions of species' ranges, occurrence records need to be carefully evaluated with (1) appropriate filters (e.g., altitude range, ecosystem); (2) taxonomic monographs and/or specialist corroboration; and (3) validation through field searches. This study points out the implications of generating SDMs produced with unverified online records to guide species-specific conservation strategies since inaccurate range predictions can have important consequences when estimating species' extinction risks. © 2019 by the authors.

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Alkaloid Profiling and Anti-Cholinesterase Potential of Three Different Genera of Amaryllidaceae Collected in Ecuador: Urceolina Rchb., Clinanthus Herb. and Stenomesson Herb.

2024 , Luciana R. Tallini , Karen Acosta León , Raúl Chamorro , Edison H. Osorio , Jaume Bastida , Lou Jost , Oleas Gallo, Nora Helena

Ecuador is an important center of biodiversity for the plant subfamily Amaryllidoideae, known for its important bioactive molecules. This study aimed to assess the chemical and biological potential of four different Amaryllidoideae species collected in Ecuador: Urceolina formosa, Urceolina ruthiana, Clinanthus incarnatus, and Stenomesson aurantiacum. Twenty-six alkaloids were identified in the bulb extracts of these species using GC-MS. The extract of S. aurantiacum exhibited the greatest structural diversity and contained the highest amounts of alkaloids, particularly lycorine and galanthamine. Only for this species, identification of all the alkaloids belonging to this chemical profile was not possible. Six of them remain unidentified. The potential of these three Amaryllidoideae genera against Alzheimer’s disease was then evaluated by measuring their AChE and BuChE inhibitory activity, revealing that C. incarnatus and U. formosa (from Sucumbíos province) showed the best results with IC50 values of 1.73 ± 0.25 and 30.56 ± 1.56 µg·mL−1, respectively. Molecular dynamic assays were conducted to characterize the possible interactions that occurs among 2-hydroxyanhydrolycorine and the AChE enzyme, concluded that it is stabilized in the pocket in a similar way to galanthamine. This study expands our understanding of the biodiversity of Amaryllidoideae species from Ecuador, highlighting their potential as source of chemical compounds with pharmaceutical applications.

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Population genetic structure of Phaedranassa cinerea Ravenna (Amaryllidaceae) and conservation implications

2025 , María Belén Buenaño , Carmen Ulloa Ulloa , Javier Francisco-Ortega , Alan W. Meerow , Oleas Gallo, Nora Helena

Background: Andean orography has shaped the endemism of plant species in montane forests, creating a mosaic of habitats in small and isolated areas. Understanding these endemic species' genetic diversity patterns is crucial for their conservation. Phaedranassa cinerea (Amaryllidaceae), a species restricted to the western Andes of Ecuador, is listed as “vulnerable” according to the IUCN criteria. This study seeks to determine whether there is genetic structure among and within Phaedranassa cinerea populations, estimate the timing of their genetic divergence, and recommend conservation strategies based on these genetic structure findings. Results: Using 13 microsatellites and a Bayesian approach, we analyzed the genetic differentiation of P. cinerea and possible diversification scenarios. Our results indicate that the genetic diversity of P. cinerea is lower than congeneric species. The Bayesian analysis identified two genetic groups, with no evidence of isolation by distance. Populations in the northwest of the Ecuadorean Andes have less allele richness compared to those in the southwest. Additionally, the species exhibits excess homozygosity and evidence of bottlenecks. Our Bayesian analysis suggests that the differentiation among populations was not older than 5,000 years and was as recent as 600 years ago for some of the populations. Based on the geographic distribution of the known populations, the species should be listed as endangered instead of vulnerable to extinction. Conclusions: Phaedranassa cinerea shows lower genetic diversity than related species, with the most variation within populations. We identified two to four genetic groups, suggesting recent divergence along the ridges of the western Andes. The findings suggest that conservation efforts should focus on securing genetic exchange between populations to preserve the genetic diversity of P. cinerea.

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Taxonomy based on science is necessary for global conservation

2018 , Thomson S.A. , Pyle R.L. , Ahyong S.T. , Alonso-Zarazaga M. , Ammirati J. , Araya J.F. , Ascher J.S. , Audisio T.L. , Oleas Gallo, Nora Helena

[No abstract available]

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Typification of names of Weinmannia (Cunoniaceae) of species described by José Cuatrecasas from Colombian collections

2025 , Carmen Ulloa Ulloa , Andrea Chaspuengal-Morales , Francisco Fajardo-Gutiérrez , Oleas Gallo, Nora Helena

We propose 18 new lectotype designations for names of Weinmannia, five of which are second-step typifications involving four inadvertent first-step lectotype designations, and 13 of them are designations of one single duplicate at the herbarium where deposited. José Cuatrecasas described all, but one, of the taxa from collections made in Colombia. We clarify the lectotypification for Weinmannia parvifoliolata Cuatrec. Finally, we propose one lectotype designation for W. cochensis described by Georg Hieronymus.

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Population genetics of the Federally Threatened Miccosukee gooseberry (Ribes echinellum), an endemic North American species

2014 , Oleas Gallo, Nora Helena , von Wettberg E.J.B. , Negrón-Ortiz V.

Ribes echinellum (Coville) Rehder (Miccosukee gooseberry; Grossulariaceae) is a Federally Threatened species known from only two localities: Jefferson County (Florida, FL) and McCormick County (South Carolina, SC). This perennial shrub, ca. 1 m tall, is deciduous, and reproduces both vegetatively (clonal growth) and sexually (seed production). Recent surveys of the FL population revealed a dramatic decline in plant numbers. To assist in conservation and management of this species in FL and SC populations, microsatellite genetic markers were used to identify genotypes and assess the genetic structure of R. echinellum. We genotyped seven microsatellite loci in 102 individuals: 74 collected in FL and 28 in SC. Unbiased heterozygosity was between 0.28 and 0.53. All seven loci were polymorphic, showing a range of 1.52-2.13 effective number of alleles per locus (mean = 1.75). The two populations of R. echinellum show low genetic diversity, especially in SC. Clonality was not widespread, but was higher in the SC population. Both populations show signatures of bottlenecks but isolation by distance was not evident. We found significant deviation from HW equilibrium, with higher number of heterozygotes than expected. However when HW test was done for the combined populations as two separate groups, only FL showed a significant HW test and for SC the test was non-significant. Bayesian analysis and FST values suggest high genetic divergence between the populations. These results are important for developing a recovery plan and an ex situ and reintroduction conservation programs. © 2014 Springer Science+Business Media Dordrecht (outside the USA).